2024
Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila Eichler K, Hampel S*, Adrián Alejandro-García*, Steven A. Calle-Schuler, Alexis Santana-Cruz, Lucia Kmecova, Jonathan M. Blackburn, Eric D. Hoopfer, Seeds AM (2024) eLife
2023
Neuronal wiring diagram of an adult brain Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Philipp Schlegel, Szi-chieh Yu, Claire E. McKellar, Albert Lin, Marta Costa, Katharina Eichler, Yijie Yin, Will Silversmith, Casey Schneider-Mizell, Chris S. Jordan, Derrick Brittain, Akhilesh Halageri, Kai Kuehner, Oluwaseun Ogedengbe, Ryan Morey, Jay Gager, Krzysztof Kruk, Eric Perlman, Runzhe Yang, David Deutsch, Doug Bland, Marissa Sorek, Ran Lu, Thomas Macrina, Kisuk Lee, J. Alexander Bae, Shang Mu, Barak Nehoran, Eric Mitchell, Sergiy Popovych, Jingpeng Wu, Zhen Jia, Manuel Castro, Nico Kemnitz, Dodam Ih, Alexander Shakeel Bates, Nils Eckstein, Jan Funke, Forrest Collman, Davi D. Bock, Gregory S.X.E. Jefferis, H. Sebastian Seung, Mala Murthy, FlyWire Consortium (2023) bioRxiv
Whole-brain annotation and multi-connectome cell typing quantifies circuit stereotypy in Drosophila Philipp Schlegel, Yijie Yin, Alexander S. Bates, Sven Dorkenwald, Katharina Eichler, Paul Brooks, Daniel S. Han, Marina Gkantia, Marcia dos Santos, Eva J. Munnelly, Griffin Badalamente, Laia Serratosa Capdevila, Varun A. Sane, Markus W. Pleijzier, Imaan F.M. Tamimi, Christopher R. Dunne, Irene Salgarella, Alexandre Javier, Siqi Fang, Eric Perlman, Tom Kazimiers, Sridhar R. Jagannathan, Arie Matsliah, Amy R. Sterling, Szi-chieh Yu, Claire E. McKellar, FlyWire Consortium, Marta Costa, H. Sebastian Seung, Mala Murthy, Volker Hartenstein, Davi D. Bock, Gregory S.X.E. Jefferis (2023) bioRxiv
A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing Philip K. Shiu, Gabriella R. Sterne, Nico Spiller, Romain Franconville, Andrea Sandoval, Joie Zhou, Neha Simha, Chan Hyuk Kang, Seongbong Yu, Jinseop S. Kim, Sven Dorkenwald, Arie Matsliah, Philipp Schlegel, Szi-chieh Yu, Claire E. McKellar, Amy Sterling, Marta Costa, Katharina Eichler, Gregory S.X.E. Jefferis, Mala Murthy, Alexander Shakeel Bates, Nils Eckstein, Jan Funke, Salil S. Bidaye, Stefanie Hampel, Andrew M. Seeds, Kristin Scott (2023) bioRxiv
Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila Eichler K, Hampel S, Alejandro-García A, Calle-Schuler SA, Santana-Cruz A, Kmecova L, Blagburn JM, Hoopfer ED, Seeds AM (2023) bioRxiv
2020
Distinct subpopulations of mechanosensory chordotonal organ neurons elicit grooming of the fruit fly antennae Hampel S, Eichler K, Yamada D, Bock DD, Kamikouchi A, Seeds AM (2020) eLife
Convergence of distinct subpopulations of mechanosensory neurons onto a neural circuit that elicits grooming Hampel S, Eichler K, Yamada D, Kim H, Horigome M, Franconville R, Bock DD, Kamikouchi A, Seeds AM (2020) bioRxiv
A Systematic Nomeclature for the Drosophila Ventral Nerve Cord Court R, Namiki S, Armstrong JD … , Seeds AM (13/19), … , Tuthill JC, Williams DW, Shepherd D (2020) Neuron / (preprint: A Systematic Nomenclature for the Drosophila Ventral Nervous System Court RC, Armstrong JD, Börner J… Seeds AM (13/19), Williams DW. (2017) bioRxiv
2017
Simultaneous Activation Of Parallel Sensory Pathways Promotes A Grooming Sequence In Drosophila Hampel S, McKellar CE, Simpson JH, Seeds AM (2017) eLife / (preprint: Simultaneous Activation Of Parallel Sensory Pathways Promotes A Grooming Sequence In Drosophila. Hampel S, McKellar CE, Simpson JH, Seeds AM (2017) bioRxiv
Axon Death Pathways Converge on Axundead to Promote Functional and Structural Axon Disassembly Neukomm LJ, Burdett TC, Seeds AM, Hampel S, Coutinho-Budd JC, Farley JE, Wong J, Karadeniz YB, Osterloh JM, AE, Freeman MR (2017) Neuron
2016
Targeted manipulation of neural activity in behaving adult flies Hampel S, Seeds AM (2016) PeerJ Preprints 4:e2354v2. Now published in the book: Decoding Neural Circuit Structure and Function. (2017) Springer
2015
A neural command circuit for grooming movement control Hampel S, Franconville R, Simpson JH, Seeds AM (2015) eLife
2014
A suppression hierarchy among competing motor programs drives sequential grooming in Drosophila Seeds AM, Ravbar P, Chung P, Hampel S, Midgley FM Jr, Mensh BD, Simpson JH. (2014) eLife
2012
Neuronal basis of innate olfactory attraction to ethanol in Drosophila Schneider A, Ruppert M, Hendrich O, Giang T, Ogueta M, Hampel S, Vollbach M, Büschges A, Scholz H. (2012) PLoS One
BrainAligner: 3D registration atlases of Drosophila brains Peng H, Chung P, Long F, Qu L, Jenett A, Seeds AM, Myers EW, Simpson JH (2011) Nature Methods
2011
Drosophila Brainbow: a recombinase-based fluorescence labeling technique to subdivide neural expression patterns Hampel S, Chung P, McKellar CE, Hall D, Looger LL, Simpson JH (2011) Nature Methods
Other publications
Inositol phosphate kinase 2 is required for imaginal disc development in Drosophila Seeds AM, Tsui MM, Sunu C, Spana EP, York JD. (2015) Proc. Natl. Acad. Sci.
Roles for inositol polyphosphate kinases in the regulation of nuclear processes and developmental biology Seeds AM, Frederick JP, Tsui MM, York JD (2007) Adv. Enzyme. Regul.
Inositol polyphosphate kinases: regulators of nuclear function Seeds AM, York JD. (2007) Biochem. Soc. Symp.
Inositol phosphate metabolomics: merging genetic perturbation with modernized radiolabeling methods Stevenson-Paulik J, Chiou ST, Frederick JP, dela Cruz J, Seeds AM, Otto JC, York JD (2006) Methods
Molecular definition of a novel inositol polyphosphate metabolic pathway initiated by inositol 1,4,5-trisphosphate 3-kinase activity in Saccharomyces cerevisiae Seeds AM, Bastidas RJ, York JD (2005) J. Biol. Chem.
A molecular basis for inositol polyphosphate synthesis in Drosophila melanogaster Seeds AM, Sandquist JC, Spana EP, York JD (2004) J. Biol. Chem.
The specific binding of small molecule isoprenoids to rhoGDP dissociation inhibitor (rhoGDI) Mondal MS, Wang Z, Seeds AM, Rando RR (2000) Biochemistry